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e-Invoice Exemptions in Malaysia: Who Qualifies, Rules & Process

Updated on: Apr 4th, 2025

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19 min read

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With the launch of the second phase of e-invoicing in Malaysia since January 1, 2025, businesses with an annual turnover between RM 25 million and RM 100 million have transitioned to comply with e-invoicing requirements. However, it’s important to note that not all businesses or transactions fall under the e-invoicing mandate.

The Inland Revenue Board of Malaysia (IRBM) has specified exemptions to accommodate certain entities and transaction types. This guide outlines the latest exemption criteria, based on the LHDNM e-Invoice General FAQs (January 2025 Update) and the IRBM e-Invoice Specific Guideline (Version 4.0).

Summary of all e-Invoice Exemptions in Malaysia

Here is a summary table of all e-Invoicing exemptions in Malaysia based on the latest guidelines:

Category

Exemptions

Entities & Individuals Exempt

Certain government bodies, royalty, and diplomatic offices are exempt from e-Invoicing due to their sovereign, statutory, or international status.

Threshold Exemptions

- Businesses with annual turnover < RM150,000 are exempted (except subsidiaries or related companies with combined revenue > RM150,000).

Types of Income & Payments Exempt

- Employment income (salaries, allowances, benefits) 

- Alimony payments 

- Pensions 

- Specific dividend distributions 

- Scholarships & education-related payments 

- Zakat contributions

Specific Transactions Exempt

- Director Fees under contract of service (employment)

- Refundable deposits

- Rental Income if the landlord is not running a business

- Inter-department/Inter-division Transactions

- Free or refundable vouchers

- Refund of wrong payments, overpayments, or security deposits.

Cross-Border Transactions

- Foreign income does not require e-Invoicing. 

Interim Relaxation Period

A 6-month grace period is provided for businesses transitioning to e-Invoicing, during which no penalties apply, and existing invoices can still be used.

Who is required to issue e-Invoice in Malaysia?

Before getting into the exemptions, here are the persons and transactions subject to e-invoicing requirements.

Applicable Entities: E-invoice is mandatory for all taxpayers involved in commercial activities in Malaysia, including associations, bodies of persons, companies, and so on.

Transaction Types Covered

Self-Generation by Buyer: If the supplier is a foreign entity or not subject to e-Invoicing rules in Malaysia, the buyer must self-generate the e-Invoice.

Implementation Timeline

  • Companies with annual turnover exceeding RM100 million: Mandatory from 1 August 2024.
  • Companies with turnover between RM25 million and RM100 million: Mandatory from 1 January 2025.
  • All other taxpayers: Mandatory from 1 July 2025.

Entities and Persons Exempt from Issuing e-Invoice

The following entities and individuals are exempt from issuing e-Invoices, including self-billed e-Invoices:

  • Ruler and Ruling Chief (as per Section 76 of the Income Tax Act 1967).
  • Former Ruler and Ruling Chief (except former Governor or Yang di-Pertua Negara of a State).
  • Royal Consorts (Raja Perempuan, Sultanah, Tengku Ampuan, etc.).
  • Government agencies, State authorities, Local authorities.
  • Statutory bodies and statutory authorities.
  • Facilities operated by the above authorities (hospitals, clinics, multipurpose halls, etc.).
  • Foreign diplomatic and consular offices.

Types of Income and Transactions Exempt from e-Invoicing

Certain types of income and transactions do not require an e-Invoice, including:

  • Employment income (salary, allowances, and benefits).
  • Alimony payments.
  • Pensions and government allowances.
  • Dividend distributions in specific circumstances.
  • Scholarships and education-related payments.
  • Zakat contributions.

Exemptions from e-Invoicing for Specific Transactions

The latest e-Invoicing guidelines provide clear exemptions for specific types of transactions where e-Invoices are not required or have special conditions. Below is a detailed breakdown of the exemptions:

Director Fees

The requirement for e-Invoice issuance depends on the nature of the contractual agreement with the company:

  • Contract of Service (Employment Income):  If a director is employed under a service contract, their income is classified as employment income. No e-Invoice for salaries, allowances, or any payments under this category is required.
  • Contract for Service (Independent Work): If a director is engaged under a contract for service, meaning they provide services independently (like a consultant), the fees are not considered employment income. An e-Invoice must be issued for any payments received under this arrangement.

Deposits

The e-Invoice requirement depends on whether the deposit is refundable or non-refundable:

  • Refundable Deposits: No e-invoice is required at the time of payment. If the deposit is later forfeited, an e-invoice must be issued at that point.
  • Non-Refundable Deposits: e-Invoice issuance is required at the time of payment.

Rental Income

The e-invoice requirement depends on whether the landlord is conducting a business:

  • Landlord Conducting a Business: Must issue an e-invoice to the tenant.
  • Landlord NOT Conducting a Business: If the tenant is a business entity, the tenant must issue a self-billed e-invoice for the rental payment.

Inter-Department / Inter-Division Transactions

No e-invoice is required for transactions within the same company, as these do not involve independent taxable entities. Businesses may choose to issue e-invoices for internal records, but it is not mandatory.

Gift Cards, Vouchers, and Loyalty Points

The treatment of e-invoices depends on the nature of the voucher:

  • Free or Refundable Vouchers: No e-invoice is required at the time of issuance. If the voucher is redeemed, an e-invoice must be issued at that point.
  • Non-Refundable Vouchers: e-Invoice is required at the time of sale.
  • Expired Vouchers: No e-Invoice required for expired vouchers unless they were refundable.

Refund of Payments

No e-invoice is required for the following payment returns:

  • Wrong Payments: If a customer or supplier accidentally transfers funds and the money is refunded, an e-invoice is not needed.
  • Overpayments: If a buyer overpays an invoice and the excess amount is refunded, no e-invoice is required.
  • Return of Security Deposits: If a refundable deposit is returned to the payer, no e-Invoice is required.

Cross-Border Transactions

The e-invoicing requirements for international transactions depend on whether the entity is buying or selling:

  • Foreign Income: No e-invoice is required for income received from overseas entities.
  • Imports: Malaysian buyers must issue self-billed e-invoices when purchasing from foreign suppliers.
  • Exports: Malaysian sellers must issue e-Invoices for sales to foreign buyers.

Special Exemptions During the Interim Relaxation Period

To facilitate a smooth transition, the IRBM has granted a 6-month relaxation period for businesses adopting e-Invoices for the first time:

Targeted Taxpayers

Interim Relaxation Period

Turnover > RM100 million

1 Aug 2024 – 31 Jan 2025

Turnover > RM25 million – RM100 million

1 Jan 2025 – 30 Jun 2025

All other taxpayers

1 Jul 2025 – 31 Dec 2025

During this period:

  • Existing invoices may still be used instead of e-Invoices.
  • No penalties for non-compliance will be imposed.
  • Taxpayers can voluntarily implement e-Invoicing before the deadline.

Reasons for exemption from e-invoice in Malaysia

The exemptions from implementing e-Invoice in Malaysia are provided for several reasons:

  • Sovereign Status: Entities such as rulers, ruling chiefs, and their consorts are exempted due to their sovereign status, which involves different legal and administrative frameworks.
  • Government Regulations: Government bodies, state authorities, and local authorities are exempted as their financial transactions are governed by specific regulations and accounting practices separate from commercial entities.
  • Different Legislative Mandates: Statutory bodies operate under their own legislative mandates and accounting procedures, which does not align with commercial e-invoicing requirements.
  • International Agreements: Consular offices and personnel are often subject to diplomatic protocols and international agreements that dictate their financial processes, warranting exemption from commercial invoicing regulations.
  • Operational Efficiency: Exempting certain entities and transactions streamlines the e-invoicing implementation process, focusing resources on the most necessary and relevant areas.
  • Avoidance of Multiple Reporting: Certain types of income, such as employment income and distributions of dividends, are already subject to other forms of documentation and reporting.

Scholarship

Impact of e-invoice exemptions in Malaysia

There are both positive and negative impact of e-invoice exemptions in Malaysia. Here are some major impacts of exemptions.

  1. Exempt entities benefit from reduced administrative burden and cost savings.
  2. Enforcement of e-invoicing regulations becomes more challenging with exemptions in place.
  3. Exemptions lead to a lack of uniformity in the documentation and SST returns.
  4. Exemptions reduce the workload on regulatory officials tasked with overseeing e-invoicing compliance.

Conclusion

Malaysia’s e-invoicing exemptions reflect a balanced approach, ensuring that critical businesses comply while providing necessary relief to smaller businesses, government bodies, and non-commercial transactions. These exemptions ensure that e-Invoicing targets the right business activities without imposing unnecessary administrative burdens on non-commercial entities and exempt transactions. 

Furthermore, embracing efficient invoicing solutions like those offered by ClearTax can significantly smoothen this transition towards e-invoicing.

ClearTax with its extensive experience across various nations, provides simplified, faster, and more efficient e-invoicing solutions, making the e-invoicing process compliant and highly efficient. 

Frequently Asked Questions

Is e-invoicing mandatory in Malaysia?

Yes, e-invoicing is mandatory for businesses undertaking commercial activities in Malaysia. However, exemptions exist for certain entities and transactions.

Is e-invoicing mandatory for B2B-exempted goods?

Yes, e-invoicing is mandatory for all B2B transactions in Malaysia, regardless of the taxability or nature of goods or services. There are no exceptions according to the e-Invoicing guidelines by IBRM.

Who needs to make an e-invoice?

Every business conducting business in Malaysia needs to generate e-invoices. However, implementation is phased. Entities with a turnover above RM 100 million should begin generating e-invoices starting from 1st August.

What is the invoicing requirement on exempt sales?

The invoicing requirement applies to all sales, including exempt ones. As per the e-Invoicing guidelines by IBRM, there are no exceptions based on the taxability or nature of goods or services.

Is e-invoicing mandatory for B2C?

Yes, e-invoicing is mandatory for B2C transactions in Malaysia. However, if the consumer doesn't require an e-invoice, a business can create one consolidated e-invoice for the entire month.

Is e-invoicing mandatory for B2B?

Yes, e-invoicing is mandatory for all B2B transactions in Malaysia.

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